|
||||||||||
PREV CLASS NEXT CLASS | FRAMES NO FRAMES All Classes | |||||||||
SUMMARY: NESTED | FIELD | CONSTR | METHOD | DETAIL: FIELD | CONSTR | METHOD |
java.lang.Objectde.jstacs.AnnotatedEntity
de.jstacs.results.Result
de.jstacs.utils.galaxy.GalaxyAdaptor.FileResult
public static class GalaxyAdaptor.FileResult
Result
for files that are results of some computation. Also used to link
e.g. PDFs of images to GalaxyAdaptor.LinkedImageResult
s.
Field Summary |
---|
Fields inherited from class de.jstacs.AnnotatedEntity |
---|
comment, datatype, name |
Constructor Summary | |
---|---|
GalaxyAdaptor.FileResult(StringBuffer rep)
Creates a new GalaxyAdaptor.FileResult from its XML-representation |
|
GalaxyAdaptor.FileResult(String name,
String comment,
String fullPath)
Creates a new GalaxyAdaptor.FileResult with name, comment, and path to the file. |
|
GalaxyAdaptor.FileResult(String name,
String comment,
String path,
String filename,
String extension)
Creates a new GalaxyAdaptor.FileResult with name, comment, path to the file, filename and extension. |
Method Summary | |
---|---|
protected void |
appendFurtherInfos(StringBuffer sb)
This method can be used in the method Storable.toXML() to extract
further information (name, comment, datatype). |
protected void |
extractFurtherInfos(StringBuffer rep)
This method can be used in the constructor with parameter StringBuffer to
extract the further information. |
String |
getExtension()
Returns the filename extension |
String |
getFilename()
Returns the filename. |
String |
getPath()
Returns the path of the directory containing the file |
File |
getValue()
Returns the value of the AnnotatedEntity . |
String |
getXMLTag()
This method returns a tag used as outer tag of the XML description. |
void |
setExtension(String extension)
Sets the filename extension |
void |
setFilename(String filename)
Sets the file |
void |
setPath(String path)
Sets the path of the directory containing the file to path |
Methods inherited from class de.jstacs.results.Result |
---|
checkDatatype, createResult, isCastableResult, isComparableResult |
Methods inherited from class de.jstacs.AnnotatedEntity |
---|
getComment, getDatatype, getName, toXML |
Methods inherited from class java.lang.Object |
---|
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Constructor Detail |
---|
public GalaxyAdaptor.FileResult(String name, String comment, String fullPath)
GalaxyAdaptor.FileResult
with name, comment, and path to the file.
name
- the name of the resultcomment
- the comment for the resultfullPath
- the path to the filepublic GalaxyAdaptor.FileResult(String name, String comment, String path, String filename, String extension)
GalaxyAdaptor.FileResult
with name, comment, path to the file, filename and extension.
name
- the name of the resultcomment
- the comment for the resultpath
- the path to the directory containing the filefilename
- the filename without extensionextension
- the filename extensionpublic GalaxyAdaptor.FileResult(StringBuffer rep) throws NonParsableException
GalaxyAdaptor.FileResult
from its XML-representation
rep
- the representation
NonParsableException
- if pre could not be parsedMethod Detail |
---|
public String getXMLTag()
AnnotatedEntity
getXMLTag
in class AnnotatedEntity
protected void appendFurtherInfos(StringBuffer sb)
AnnotatedEntity
Storable.toXML()
to extract
further information (name, comment, datatype).
appendFurtherInfos
in class AnnotatedEntity
sb
- a XML representation of the main information as
StringBuffer
Storable.toXML()
protected void extractFurtherInfos(StringBuffer rep) throws NonParsableException
AnnotatedEntity
StringBuffer
to
extract the further information.
extractFurtherInfos
in class AnnotatedEntity
rep
- a XML represenation of the main information as
StringBuffer
NonParsableException
- if the XML representation is not parsableAnnotatedEntity.AnnotatedEntity(StringBuffer)
public File getValue()
AnnotatedEntity
AnnotatedEntity
.
getValue
in class AnnotatedEntity
AnnotatedEntity
public String getPath()
public void setPath(String path)
path
path
- the new pathpublic String getFilename()
public void setFilename(String filename)
filename
- the new filenamepublic String getExtension()
public void setExtension(String extension)
extension
- the new extension
|
||||||||||
PREV CLASS NEXT CLASS | FRAMES NO FRAMES All Classes | |||||||||
SUMMARY: NESTED | FIELD | CONSTR | METHOD | DETAIL: FIELD | CONSTR | METHOD |