Uses of Class
de.jstacs.parameters.Parameter

Packages that use Parameter

de.jstacs.io	Provides classes for reading data from and writing to a file and storing a number of datatypes, including all primitives, arrays of primitives, and Storables to an XML-representation
de.jstacs.parameters	This package provides classes for parameters that establish a general convention for the description of parameters as defined in the Parameter-interface.

Uses of Parameter in de.jstacs.io

Methods in de.jstacs.io with parameters of type Parameter

static boolean	ParameterSetParser.getBooleanFromParameter(Parameter par) Returns the boolean which is the value of the Parameter par.
static byte	ParameterSetParser.getByteFromParameter(Parameter par) Returns the byte which is the value of the Parameter par.
static double	ParameterSetParser.getDoubleFromParameter(Parameter par) Returns the double which is the value of the Parameter par.
static float	ParameterSetParser.getFloatFromParameter(Parameter par) Returns the float which is the value of the Parameter par.
static int	ParameterSetParser.getIntFromParameter(Parameter par) Returns the int which is the value of the Parameter par.
static long	ParameterSetParser.getLongFromParameter(Parameter par) Returns the long which is the value of the Parameter par.
static short	ParameterSetParser.getShortFromParameter(Parameter par) Returns the short which is the value of the Parameter par.
static String	ParameterSetParser.getStringFromParameter(Parameter par) Returns the String which is the value of the Parameter par.

Uses of Parameter in de.jstacs.parameters

Subclasses of Parameter in de.jstacs.parameters

class	AbstractSelectionParameter Class for a collection parameter, i.e. a parameter that provides some collection of possible values the user can choose from.
class	EnumParameter This class implements a SelectionParameter based on an Enum.
class	FileParameter Class for a Parameter that represents a local file.
class	MultiSelectionParameter Class for a Parameter that provides a collection of possible values.
class	ParameterSetContainer Class for a ParameterSetContainer that contains a ParameterSet as value.
class	RangeParameter Class for a parameter wrapper that allows SimpleParameters to be set to a set of values.
class	SelectionParameter Class for a collection parameter, i.e. a parameter that provides some collection of possible values the user can choose from.
class	SimpleParameter Class for a "simple" parameter.

Fields in de.jstacs.parameters declared as Parameter

protected Parameter	SequenceScoringParameterSet.alphabet The alphabet the model works on
protected Parameter	SequenceScoringParameterSet.length The length of sequences the model can work on or 0 for arbitrary length

Methods in de.jstacs.parameters that return Parameter

Parameter	Parameter.clone()
Parameter	SequenceScoringParameterSet.getParameterAt(int i)
Parameter	ParameterSet.getParameterAt(int i) Returns the Parameter at position i.
Parameter	ArrayParameterSet.getParameterAt(int i)
Parameter	ParameterSet.getParameterForName(String name) Returns the Parameter with name name.
Parameter	ParameterSetTagger.getParameterFromTag(String tag) This method returns the Parameter specified by the tag
Parameter	SimpleParameter.getRangedInstance()
Parameter	Rangeable.getRangedInstance() Returns an instance of RangeIterator that has the same properties as the current instance, but accepts a range or list of values.

Methods in de.jstacs.parameters with parameters of type Parameter

void	ParameterSet.ParameterList.add(int idx, Parameter p)
void	ParameterSet.ParameterList.add(Parameter... p)
boolean	Parameter.isComparable(Parameter p) This method checks whether the given Parameter is comparable to the current instance, i.e. whether the Class, the DataType, the name and the comment are identical.
void	ParameterSet.ParameterList.set(int idx, Parameter p)

Method parameters in de.jstacs.parameters with type arguments of type Parameter

String

ParameterSetTagger.toString(Comparator<Map.Entry<String,ComparableElement<Parameter,Integer>>> ec) This method allows to get a String representation where the tagged parameters are sorted in some specific way.

Constructors in de.jstacs.parameters with parameters of type Parameter

ParameterSet(Parameter[] parameters)
Constructs a ParameterSet out of an array of Parameters.

SimpleParameterSet(Parameter... parameters)
Creates a new SimpleParameterSet from an array of Parameters.

Constructor parameters in de.jstacs.parameters with type arguments of type Parameter

ParameterSet(ArrayList<Parameter> parameters)
Constructs a ParameterSet out of an ArrayList of Parameters.