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Your anwesr was just what I needed. It’s made my day!

Licensing Information

Jstacs is free software: you can redistribute it and/or modify under the terms of the GNU General Public License version 3 or (at your option) any later version as published by the Free Software Foundation.

Current release

You can download Jstacs version 1.4 here.
You can find the API documentation for this release here.

Applications

Applications currently using Jstacs:

Bug reports & Feature requests

You can submit bug reports and feature requests via the Jstacs trac or by mail to jstacs@informatik.uni-halle.de. Before you open a new bug ticket, please check if that bug has already been submitted in the list of existing tickets.

Latest Paper

The paper De-novo discovery of differentially abundant transcription factor binding sites including their positional preference has been published in PLoS Computational Biology.

Further papers and projects can be found under Projects.

Workshop

The first Jstacs workshop will be held on May, 19th in room 5.09 at the Institute of Computer Science at Martin Luther University Halle. Besides a general introduction to Jstacs, information on new features of Jstacs 1.5, and talks of Jstacs users, we will have a discussion on future directions of Jstacs. More details on the program can be found here.