Workshop
The first Jstacs workshop will be held on May, 19th at Martin Luther University. The aim of the workshop is to increase the visibility of Jstacs and the implemented projects, to bring developers and users together, as well as to identify further needs.
Depending on the audience the workshop will be held in English or German.
Program
| Time | Presenter | Type | Title & Infos |
|---|---|---|---|
| 09:00 - 10:00 | Jan Grau & Jens Keilwagen | Tutorial | Introduction to Jstacs
Information about: Alphabet, AlphabetContainer, Sequence, Sample, Model, ScoringFunction, Classifier, Optimization, Parameter, ParameterSet, StrandModel |
| 10:00 - 10:45 | Jan Grau & Jens Keilwagen | Tutorial | New Features of Jstacs 1.5
Information about: Alignment, HMM package, Discriminative Sampling |
| 10:45 - 11:15 | Michael Scharfe | Talk | A Hidden Markov Model for Phylogenetic Footprinting |
| 11:15 - 13:00 | Lunch | ||
| 13:00 - 13:30 | Michael Seifert | Talk | Exploiting prior knowledge and gene distances in the analysis of tumor expression profiles with extended Hidden Markov Models |
| 13:30 - 14:00 | Ralf Eggeling | Talk | Maximum Tsallis Entropy Models |
| 14:00 - 14:30 | Martin Gleditzsch | Talk | tba |
| 14:30 - 15:15 | Discussion | Discussion on future directions and improvements of Jstacs | |
Location
The workshop will be held on May, 19th in room 5.09 at the Institute of Computer Science at Martin Luther University Halle (Von-Seckendorff-Platz 1).
Contact
If you have any questions or comments, please do not hesitate to contact us by mail jstacs@informatik.uni-halle.de.
