User contributions for Keilwagen
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2 December 2009
- 18:3018:30, 2 December 2009 diff hist +1,577 N Train classifiers using MCL and MSP New page: <source lang="java5"> //read FastA-files Sample[] data = { new DNASample( args[0] ), new DNASample( args[1] ) }; AlphabetContainer container = data[0].getAlphabetContaine... current
- 16:2716:27, 2 December 2009 diff hist +31 Performing a 10-fold cross validation No edit summary
- 16:2616:26, 2 December 2009 diff hist −131 Saving and loading a model No edit summary current
- 16:2516:25, 2 December 2009 diff hist −187 Training a classifier and classifying new sequences No edit summary
- 15:4615:46, 2 December 2009 diff hist +118 Loading data No edit summary current
19 November 2009
- 18:2518:25, 19 November 2009 diff hist −6,846 Projects Replacing page with 'This site contains projects that use Jstacs. * MotifAdjuster * DiPoMM'
- 18:2218:22, 19 November 2009 diff hist +3,020 N MotifAdjuster New page: __NOTOC__ by Jens Keilwagen, Jan Baumbach, Thomas A. Kohl and Ivo Grosse. == Description == Valuable binding site annotation data are stored in databases. However, several types of errors... current
- 15:4215:42, 19 November 2009 diff hist 0 m Getting started No edit summary
- 15:4115:41, 19 November 2009 diff hist 0 m Getting started No edit summary
- 15:2915:29, 19 November 2009 diff hist +26 m Getting started No edit summary
- 15:2515:25, 19 November 2009 diff hist −1 m Getting started No edit summary
- 15:2415:24, 19 November 2009 diff hist +515 Getting started No edit summary
- 15:0415:04, 19 November 2009 diff hist +7 MiMB →Links
- 14:1114:11, 19 November 2009 diff hist 0 Acknowledgements No edit summary
- 14:0714:07, 19 November 2009 diff hist +308 N MiMB New page: == Probabilistic Approaches to Transcription Factor Binding Site Prediction == by Stefan Posch, Jan Grau, André Gohr, Jens Keilwagen, Ivo Grosse === Abstract === TODO === Links...
- 13:5313:53, 19 November 2009 diff hist +35 MediaWiki:Sidebar No edit summary
- 13:5313:53, 19 November 2009 diff hist −407 Downloads No edit summary
- 13:4813:48, 19 November 2009 diff hist +1,060 N Getting started New page: __NOTOC__ == Basic Requirements == * Make sure that you have installed [http://java.sun.com/javase/downloads/index.jsp Java] 1.5 or later. * Download latest version of [http://www.jstacs.d...
- 13:2413:24, 19 November 2009 diff hist +49 Downloads No edit summary
18 November 2009
- 15:0815:08, 18 November 2009 diff hist −9 MiMB Example No edit summary
- 15:0315:03, 18 November 2009 diff hist +13,030 N MiMB Example New page: '''This class contains all code snippets used in the chapter ''Probabilistic Approaches to Transcription Factor Binding Site Prediction'' of the book ''Computational Biology of Transcripti...
15 August 2009
- 07:2007:20, 15 August 2009 diff hist +422 Projects No edit summary
31 July 2009
- 14:1514:15, 31 July 2009 diff hist 0 Projects No edit summary
4 May 2009
- 08:0508:05, 4 May 2009 diff hist +44 Projects No edit summary
8 April 2009
- 11:2111:21, 8 April 2009 diff hist −9 Projects No edit summary
- 11:1911:19, 8 April 2009 diff hist −9 Projects No edit summary
- 11:1211:12, 8 April 2009 diff hist +1 Version history No edit summary
30 October 2008
- 17:3117:31, 30 October 2008 diff hist +2,566 Projects No edit summary
29 September 2008
- 12:0912:09, 29 September 2008 diff hist +827 N Compute and plot Receiver Operating Characteristic (ROC) and Precision-Recall (PR) curve New page: <source lang="java5"> Sample[] test; AbstractScoreBasedClassifier trainedClassifier; // TODO load data and create trained classifier Measure[] m = { Measure.ReceiverOperatingCharacterist... current
- 12:0812:08, 29 September 2008 diff hist +95 Code examples No edit summary
23 September 2008
- 08:2108:21, 23 September 2008 diff hist +1 FAQs →Using existing models
- 08:2008:20, 23 September 2008 diff hist +1 FAQs →Using existing models
19 September 2008
- 11:3311:33, 19 September 2008 diff hist +879 FAQs No edit summary
18 September 2008
- 13:0613:06, 18 September 2008 diff hist +77 Acknowledgements No edit summary
17 September 2008
- 15:5715:57, 17 September 2008 diff hist +44 N Projects New page: This site contains projects that use Jstacs.
- 14:1814:18, 17 September 2008 diff hist +21 MediaWiki:Sidebar No edit summary
12 September 2008
- 20:5120:51, 12 September 2008 diff hist −4 Performing a 10-fold cross validation No edit summary
- 20:5020:50, 12 September 2008 diff hist +3 Performing a 10-fold cross validation No edit summary
5 September 2008
- 12:3712:37, 5 September 2008 diff hist +180 Code examples No edit summary
- 11:1811:18, 5 September 2008 diff hist −28 FAQs →FAQs & Code examples
- 08:4108:41, 5 September 2008 diff hist +250 Using the REnvironment No edit summary current
- 08:3308:33, 5 September 2008 diff hist −80 Implementation of a homogeneous Markov model of order 0 based on AbstractModel No edit summary
4 September 2008
- 16:1916:19, 4 September 2008 diff hist +34 FAQs No edit summary
- 15:5915:59, 4 September 2008 diff hist +12 FAQs No edit summary
- 15:5815:58, 4 September 2008 diff hist +293 FAQs No edit summary
- 15:4615:46, 4 September 2008 diff hist 0 FAQs No edit summary
- 15:4515:45, 4 September 2008 diff hist +1,414 N FAQs New page: == FAQs & Code examples == Here we collected some questions that were asked quite often ... '''''Q: How to create an AlphabetContainer instance for DNA sequences?'''''<br> '''A:''' ''Alp...
2 September 2008
- 10:4910:49, 2 September 2008 diff hist +145 Main Page No edit summary
- 08:0608:06, 2 September 2008 diff hist +301 Main Page No edit summary
- 07:5607:56, 2 September 2008 diff hist +89 Main Page →A Java framework for statistical analysis and classification of biological sequences
