Projects: Difference between revisions

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* [[DSHMM]]: exploiting prior knowledge and gene distances in the analysis of tumor expression profiles
* [[DSHMM]]: exploiting prior knowledge and gene distances in the analysis of tumor expression profiles
* [[PHHMM]]: improved analysis of Array-CGH data
* [[PHHMM]]: improved analysis of Array-CGH data
* [[MeDIP-HMM]]: HMM-based analysis of DNA methylation profiles
* [[FlowCap]]: molecular classification of acute myeloid leukaemia (AML) using flow cytometry data
* [[FlowCap]]: molecular classification of acute myeloid leukaemia (AML) using flow cytometry data

Revision as of 08:02, 22 May 2012

This site contains projects that use Jstacs.

  • MotifAdjuster: a tool for computational reassessment of transcription factor binding site annotations
  • Prior: apples and oranges: avoiding different priors in Bayesian DNA sequence analysis
  • GenDisMix: unifying generative and discriminative learning principles
  • Dispom: de-novo discovery of differentially abundant transcription factor binding sites including their positional preference
  • MiMB: probabilistic approaches to transcription factor binding site prediction
  • DSHMM: exploiting prior knowledge and gene distances in the analysis of tumor expression profiles
  • PHHMM: improved analysis of Array-CGH data
  • MeDIP-HMM: HMM-based analysis of DNA methylation profiles
  • FlowCap: molecular classification of acute myeloid leukaemia (AML) using flow cytometry data